diff --git a/README.md b/README.md
index 5e87234..57f9271 100644
--- a/README.md
+++ b/README.md
@@ -88,7 +88,7 @@ graph TB
   - A cryptographically random authentication secret token (`auth_token`).
 - **Client Configuration Exporter**:
   ```bash
-  python Server.py --create-client-config --server-host 127.0.0.1 --server-port 9443 --client-out client_config.json
+  python src/Server.py --create-client-config --server-host 127.0.0.1 --server-port 9443 --client-out client_config.json
   ```
   Produces an anonymous client config containing only the server socket coordinates, authentication token, and the encryption-only public key & fingerprint.
 - **Socket Protocol Framing**:
@@ -180,9 +180,11 @@ LOGAR/
 ├── .gitignore                      # Ignore venv, caches, DBs, and private keys
 ├── requirements.txt                # Unified dependencies
 ├── README.md                       # Comprehensive documentation
-├── Server.py                       # Central TCP server and Hermes API
-├── Win_Client.py                   # Windows edge forwarder
-├── Linux_Client.py                 # Linux edge forwarder
+├── src/                            # Core application source modules
+│   ├── __init__.py
+│   ├── Server.py                   # Central TCP server and Hermes API
+│   ├── Win_Client.py               # Windows edge forwarder
+│   └── Linux_Client.py             # Linux edge forwarder
 ├── server_config.sample.json       # Central server sample configuration
 ├── package_dist.py                 # Multi-platform standalone binary packaging script
 ├── upload_release.py               # Direct Gitea REST API release asset publisher
@@ -212,11 +214,11 @@ LOGAR/
    ```
 2. **Start the server** (generates `server_config.json` and keypair on first run):
    ```bash
-   python Server.py
+   python src/Server.py
    ```
 3. **Export a client configuration**:
    ```bash
-   python Server.py --create-client-config --server-host <SERVER_IP> --server-port 9443 --client-out client_config.json
+   python src/Server.py --create-client-config --server-host <SERVER_IP> --server-port 9443 --client-out client_config.json
    ```
 
 ### 2. Windows Client Deployment
@@ -287,11 +289,11 @@ The pipeline test exercises invalid token rejection, encrypted socket streaming,
 
 1. **Start the server** in Shell 1 (creates `server_config.json` on first run):
    ```bash
-   python Server.py
+   python src/Server.py
    ```
 2. **Export client configuration** in Shell 2 (required for testing):
    ```bash
-   python Server.py --create-client-config --server-host 127.0.0.1 --server-port 9443 --client-out client_config.json
+   python src/Server.py --create-client-config --server-host 127.0.0.1 --server-port 9443 --client-out client_config.json
    ```
 3. **Execute the integration test** in Shell 2:
    ```bash
@@ -301,7 +303,7 @@ The pipeline test exercises invalid token rejection, encrypted socket streaming,
 ## Continuous Integration via Gitea Actions
 
 Continuous integration is automated via [`.gitea/workflows/ci.yml`](.gitea/workflows/ci.yml) and triggers automatically on **every push** and pull request:
-1. **Syntax Compilation**: Validates all Python scripts (`Server.py`, `Win_Client.py`, `Linux_Client.py`, `package_dist.py`, `upload_release.py`, `test_pipeline.py`, and test suites).
+1. **Syntax Compilation**: Validates all Python scripts (`src/Server.py`, `src/Win_Client.py`, `src/Linux_Client.py`, `package_dist.py`, `upload_release.py`, `test_pipeline.py`, and test suites).
 2. **Component Unit Tests**: Discovers and runs all unit tests in `tests/` (`test_server.py`, `test_win_client.py`, `test_linux_client.py`).
 3. **End-to-End Pipeline Verification**: Automatically spins up the LOGAR server hub, generates test configs, runs `test_pipeline.py` (testing socket authentication, 4-run rule persistence, Hermes API report, and client integrations), and shuts down the test instance.